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Psed_2425 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2425" - FliA/WhiG subfamily RNA polymerase sigma-28 subunit in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2425FliA/WhiG subfamily RNA polymerase sigma-28 subunit (273 aa)    
Predicted Functional Partners:
Psed_1528
Anti-sigma factor (150 aa)
 
 
  0.920
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1300 aa)
   
 
 
  0.753
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1175 aa)
       
 
  0.714
Psed_2308
Response regulator receiver modulated serine phosphatase (562 aa)
 
 
  0.686
Psed_0434
Response regulator receiver modulated serine phosphatase (397 aa)
 
 
  0.683
Psed_4046
Ser/Thr phosphatase (619 aa)
 
     
  0.678
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (347 aa)
       
 
  0.665
Psed_2423
Polyketide cyclase/dehydrase (149 aa)
 
          0.598
Psed_6031
Response regulator receiver protein (149 aa)
   
 
  0.586
Psed_2758
Hypothetical protein (182 aa)
   
 
  0.586
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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