Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2437CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; KEGG: mka:MK1245 CBS domain-containing protein. (193 aa)    
Predicted Functional Partners:
Psed_2438
PFAM: FAD dependent oxidoreductase; KEGG: afv:AFLA_059740 hypothetical protein.
       0.527
Psed_2436
PFAM: Nitroreductase-like; KEGG: ami:Amir_2414 nitroreductase.
     
 0.486
Psed_0939
PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: nml:Namu_4420 cystathionine gamma-synthase.
  
  
 0.417
Psed_1840
KEGG: ami:Amir_5997 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
  
  
 0.417
Psed_3633
KEGG: svi:Svir_19090 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
  
  
 0.417
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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