STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2470PFAM: NADP-dependent oxidoreductase domain; KEGG: cai:Caci_5118 aldo/keto reductase. (297 aa)    
Predicted Functional Partners:
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.903
Psed_5978
Aryl-alcohol dehydrogenase (NADP(+)); KEGG: cai:Caci_7438 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain.
  
     0.760
Psed_4159
PFAM: NADP-dependent oxidoreductase domain; KEGG: scl:sce2610 putative oxidoreductase.
  
     0.755
Psed_5092
PFAM: NADP-dependent oxidoreductase domain; KEGG: svi:Svir_20030 predicted oxidoreductase, aryl-alcohol dehydrogenase like protein.
  
     0.738
Psed_5362
Aryl-alcohol dehydrogenase (NADP(+)); KEGG: sen:SACE_0624 aldo/keto reductase family oxidoreductase; PFAM: NADP-dependent oxidoreductase domain.
  
     0.728
Psed_5591
KEGG: sro:Sros_7952 2,5-didehydrogluconate reductase; PFAM: NADP-dependent oxidoreductase domain.
 
 
 0.699
Psed_2469
KEGG: cwo:Cwoe_0946 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
  
    0.641
Psed_2471
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mpa:MAP4047 hypothetical protein.
 
     0.619
Psed_2468
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
  
  
 0.596
Psed_2147
KEGG: sth:STH658 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain.
 
 
0.574
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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