STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2654Carbon-monoxide dehydrogenase (acceptor); KEGG: nca:Noca_0228 molybdopterin dehydrogenase, FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal. (291 aa)    
Predicted Functional Partners:
Psed_2652
TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nca:Noca_0230 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 
 0.965
Psed_2651
PFAM: Carbon monoxide dehydrogenase subunit G; KEGG: nca:Noca_0232 carbon monoxide dehydrogenase subunit G.
 
  
 0.925
Psed_2658
TIGRFAM: Carbon-monoxide dehydrogenase, large subunit; KEGG: nml:Namu_5287 carbon-monoxide dehydrogenase large subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.925
Psed_2653
Carbon-monoxide dehydrogenase (acceptor); KEGG: nca:Noca_0229 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin.
 
 0.898
Psed_2659
XshC-Cox1-family protein; PFAM: XdhC- CoxI; YHS; KEGG: art:Arth_2038 hypothetical protein.
 
  
 0.864
Psed_2559
KEGG: fre:Franean1_4699 carbon-monoxide dehydrogenase (acceptor); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.858
Psed_2498
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.857
Psed_6218
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_2811 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 
 0.857
Psed_2252
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_2310 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 
 0.856
Psed_3978
Carbon-monoxide dehydrogenase (acceptor); KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.856
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.