STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2960Carbon-monoxide dehydrogenase (acceptor); KEGG: fri:FraEuI1c_5530 (2Fe-2S)-binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin. (184 aa)    
Predicted Functional Partners:
Psed_1760
KEGG: gob:Gobs_3387 xanthine dehydrogenase subunit D; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.977
Psed_6472
Xanthine dehydrogenase; KEGG: cwo:Cwoe_4113 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.976
Psed_6470
PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding.
 
 0.961
Psed_2961
Carbon-monoxide dehydrogenase (acceptor); KEGG: tro:trd_0579 oxidoreductase, large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.959
Psed_1763
PFAM: Molybdopterin dehydrogenase, FAD-binding; KEGG: gob:Gobs_3389 molybdopterin dehydrogenase FAD-binding protein.
 
 0.945
Psed_6140
Carbon-monoxide dehydrogenase (acceptor); KEGG: cwo:Cwoe_4103 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.937
Psed_3755
KEGG: tro:trd_A0069 probable xanthine dehydrogenase subunit D (XDHase subunit D); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.934
Psed_1461
Carbon-monoxide dehydrogenase (acceptor); KEGG: tcu:Tcur_4235 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.927
Psed_3978
Carbon-monoxide dehydrogenase (acceptor); KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead.
 
 0.905
Psed_2959
Carbon-monoxide dehydrogenase (acceptor); KEGG: sti:Sthe_2308 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal.
 
 0.896
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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