Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_2995KEGG: ami:Amir_1503 monosaccharide-transporting ATPase. (376 aa)    
Predicted Functional Partners:
Psed_2996
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: ami:Amir_1504 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 
 0.994
Psed_2997
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ami:Amir_1505 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.990
Psed_2998
Glucokinase; KEGG: ami:Amir_1506 ROK family protein; PFAM: ROK.
 
     0.835
Psed_2957
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: eca:ECA1461 putative sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.798
Psed_3190
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: rhi:NGR_c06530 hypothetical ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.756
Psed_3026
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.746
Psed_0682
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.742
Psed_2260
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: rop:ROP_31040 putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.740
xylA
TIGRFAM: Xylose isomerase, actinobacteria; HAMAP: Xylose isomerase; KEGG: ace:Acel_2064 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; Belongs to the xylose isomerase family.
 
  
 0.739
Psed_4170
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: nca:Noca_0101 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.733
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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