Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_3045Regulatory protein MarR; KEGG: scb:SCAB_84441 MarR family regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR. (161 aa)    
Predicted Functional Partners:
Psed_3046
KEGG: sma:SAV_1189 regulatory protein.
 
     0.802
Psed_2946
KEGG: cai:Caci_5446 hypothetical protein.
  
     0.641
Psed_5137
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_1993 putative glyoxalase/dioxygenase.
  
     0.592
Psed_3801
KEGG: sma:SAV_1189 regulatory protein.
 
     0.550
Psed_0148
PFAM: Cupin 2, conserved barrel; KEGG: msm:MSMEG_0644 cupin domain-containing protein.
 
  
 0.520
Psed_0196
KEGG: fra:Francci3_0362 hypothetical protein.
  
   
 0.518
Psed_3048
PFAM: AmiS/UreI transporter; KEGG: gob:Gobs_2159 AmiS/UreI transporter.
 
     0.494
Psed_6002
KEGG: mva:Mvan_0652 regulatory protein.
 
     0.492
Psed_3936
KEGG: sna:Snas_4855 hypothetical protein.
 
     0.474
Psed_4722
Hypothetical protein; KEGG: dgr:Dgri_GH10507 GH10507 gene product from transcript GH10507-RA.
  
     0.431
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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