Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Psed_3085PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; KEGG: gmc:GY4MC1_3873 hydantoinase/oxoprolinase. (518 aa)    
Predicted Functional Partners:
Psed_3086
PFAM: Protein of unknown function DUF917; KEGG: drm:Dred_1546 hypothetical protein.
     0.994
Psed_6468
PFAM: Protein of unknown function DUF917; KEGG: cwo:Cwoe_4117 protein of unknown function DUF917.
     0.977
Psed_3082
PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: sen:SACE_4525 cytosine/purines/uracil/thiamine/allantoin family permease.
 
     0.771
Psed_3084
Transcriptional regulator, CdaR; KEGG: sen:SACE_4530 hypothetical protein.
 
     0.753
Psed_5912
PFAM: Acetone carboxylase, gamma subunit-related; KEGG: rxy:Rxyl_1849 putative subunit of acetophenone carboxylase.
   
 
 0.556
Psed_2670
KEGG: sti:Sthe_3498 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase.
 
 
 0.479
Psed_2457
PFAM: Hydantoinase B/oxoprolinase; KEGG: cwo:Cwoe_2300 5-oxoprolinase (ATP-hydrolyzing).
 
 
 0.477
Psed_1154
5-oxoprolinase (ATP-hydrolyzing); KEGG: msm:MSMEG_3973 N-methylhydantoinase; PFAM: Hydantoinase B/oxoprolinase.
 
 
 0.465
Psed_5503
PFAM: Hydantoinase B/oxoprolinase; KEGG: azc:AZC_2116 hydantoin utilization protein B.
 
 
 0.462
Psed_3556
5-oxoprolinase (ATP-hydrolyzing); KEGG: rer:RER_58720 hydantoinase B; PFAM: Hydantoinase B/oxoprolinase.
 
 
 0.446
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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