STRINGSTRING
Psed_3085 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3085" - Hydantoinase/oxoprolinase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3085Hydantoinase/oxoprolinase (518 aa)    
Predicted Functional Partners:
Psed_3086
Hypothetical protein (358 aa)
          0.984
egtA
Glutamate/cysteine ligase protein; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low-molecular thiol compound ergothioneine (455 aa)
     
 
  0.904
Psed_3971
Glutamate--cysteine ligase GCS2 (376 aa)
         
    0.900
Psed_6468
Hypothetical protein (362 aa)
          0.884
Psed_3082
Cytosine/purines uracil thiamine allantoin permease (447 aa)
 
          0.860
Psed_3084
Transcriptional regulator CdaR (569 aa)
 
          0.789
Psed_2457
Hydantoinase B/oxoprolinase (665 aa)
 
   
  0.606
Psed_3556
5-oxoprolinase (659 aa)
 
   
  0.589
Psed_2670
5-oxoprolinase (655 aa)
 
   
  0.589
Psed_6336
5-oxoprolinase (771 aa)
   
   
  0.534
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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