STRINGSTRING
Psed_3107 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3107" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3107Hypothetical protein (306 aa)    
Predicted Functional Partners:
Psed_3109
Hypothetical protein (263 aa)
              0.629
Psed_3108
Hypothetical protein (233 aa)
              0.629
Psed_5585
Glyoxalase/bleomycin resistance protein/dioxygenase (144 aa)
   
          0.566
Psed_0111
Hypothetical protein (164 aa)
   
          0.566
Psed_5063
Hypothetical protein (233 aa)
   
          0.559
Psed_2645
Hypothetical protein (316 aa)
   
          0.555
Psed_6169
Glyoxalase/bleomycin resistance protein/dioxygenase (126 aa)
   
          0.544
Psed_3976
Hypothetical protein (240 aa)
   
          0.538
Psed_1137
Ion transport 2 domain-containing protein (185 aa)
   
          0.538
Psed_4019
Hypothetical protein (112 aa)
   
          0.535
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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