Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_3232KEGG: swi:Swit_3075 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal. (697 aa)    
Predicted Functional Partners:
Psed_3233
PFAM: Hydantoinase B/oxoprolinase; KEGG: reu:Reut_C6222 hydantoinase B/oxoprolinase.
 
 0.984
Psed_1154
5-oxoprolinase (ATP-hydrolyzing); KEGG: msm:MSMEG_3973 N-methylhydantoinase; PFAM: Hydantoinase B/oxoprolinase.
 
 0.983
Psed_4638
KEGG: gbr:Gbro_2859 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase.
 
 0.981
Psed_3556
5-oxoprolinase (ATP-hydrolyzing); KEGG: rer:RER_58720 hydantoinase B; PFAM: Hydantoinase B/oxoprolinase.
 
 0.975
Psed_2954
5-oxoprolinase (ATP-hydrolyzing); KEGG: cai:Caci_1877 hydantoinase B/oxoprolinase; PFAM: Hydantoinase B/oxoprolinase.
 
 0.974
Psed_2457
PFAM: Hydantoinase B/oxoprolinase; KEGG: cwo:Cwoe_2300 5-oxoprolinase (ATP-hydrolyzing).
 
 0.971
Psed_2670
KEGG: sti:Sthe_3498 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase.
 
 0.910
Psed_5383
Cytosine deaminase; KEGG: bbt:BBta_2105 putative N-isopropylammelide isopropylaminohydrolase; PFAM: Amidohydrolase 3.
     
  0.900
Psed_6336
5-oxoprolinase (ATP-hydrolyzing); KEGG: nfa:nfa21950 putative hydantoinase; PFAM: Hydantoinase B/oxoprolinase.
 
 0.881
Psed_5503
PFAM: Hydantoinase B/oxoprolinase; KEGG: azc:AZC_2116 hydantoin utilization protein B.
 
 0.864
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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