Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_3239Regulatory protein ArsR; KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (116 aa)    
Predicted Functional Partners:
Psed_4470
Regulatory protein ArsR; KEGG: sro:Sros_7536 putative transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.752
Psed_4345
Transcriptional regulator, ArsR family; KEGG: nfa:nfa22980 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.736
Psed_1996
Regulatory protein ArsR; KEGG: cwo:Cwoe_3384 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.734
Psed_4947
Regulatory protein ArsR; KEGG: ccs:CCNA_01339 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.660
Psed_3240
PFAM: Extracellular ligand-binding receptor; KEGG: aau:AAur_pTC20138 putative branched-chain amino acid ABC transporter.
       0.653
Psed_3244
KEGG: aau:AAur_pTC20145 nitrile hydratase b-subunit.
 
     0.536
Psed_3772
Regulatory protein ArsR; KEGG: rha:RHA1_ro05363 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.529
Psed_3241
PFAM: Amidase; KEGG: rha:RHA1_ro00359 amidase; Belongs to the amidase family.
     
 0.479
Psed_3242
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
       0.463
Psed_3243
TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: aau:AAur_pTC20146 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit.
       0.452
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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