Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Psed_3530PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_7047 major facilitator superfamily sugar transporter. (388 aa)    
Predicted Functional Partners:
Psed_0594
PFAM: Major facilitator superfamily MFS-1; KEGG: dat:HRM2_33900 putative permease of the major facilitator superfamily.
  
     0.567
Psed_0689
PFAM: Major facilitator superfamily MFS-1; KEGG: msm:MSMEG_2810 major facilitator superfamily protein.
  
     0.534
Psed_3531
Ankyrin; KEGG: nml:Namu_4904 ankyrin.
       0.532
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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