Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_3552Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: nml:Namu_2592 TetR family transcriptional regulator. (206 aa)    
Predicted Functional Partners:
Psed_3551
PFAM: FAD dependent oxidoreductase; KEGG: nml:Namu_2591 hypothetical protein.
       0.773
arcA
HAMAP: Arginine deiminase; KEGG: scb:SCAB_23151 arginine deiminase; PFAM: Amidinotransferase.
       0.559
Psed_3549
Transcriptional regulator, AsnC family; KEGG: sco:SCO1458 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type.
     
 0.423
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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