STRINGSTRING
Psed_4064 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4064" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4064Hypothetical protein (139 aa)    
Predicted Functional Partners:
Psed_4063
Trehalose synthase (741 aa)
              0.859
Psed_3137
F420-dependent oxidoreductase (506 aa)
   
          0.736
fgd
Glucose-6-phosphate dehydrogenase, F420-dependent; Catalyzes the coenzyme F420-dependent oxidation of glucose 6-phosphate (G6P) to 6-phosphogluconolactone (334 aa)
   
          0.686
Psed_1473
F420-dependent oxidoreductase (309 aa)
   
          0.659
Psed_4225
Luciferase-like protein (347 aa)
 
          0.645
Psed_5113
F420-dependent oxidoreductase (346 aa)
 
          0.634
Psed_6234
Luciferase-like protein (356 aa)
 
          0.573
Psed_3597
GCN5-like N-acetyltransferase (178 aa)
   
          0.565
Psed_1583
F420-dependent protein (130 aa)
   
          0.565
Psed_4570
F420-dependent oxidoreductase (311 aa)
   
          0.563
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]