STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4203PFAM: Sulphate transporter/antisigma-factor antagonist STAS. (127 aa)    
Predicted Functional Partners:
Psed_4204
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kra:Krad_4270 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.598
Psed_4199
Cyclase family protein; PFAM: Putative cyclase; KEGG: nca:Noca_4084 cyclase family protein.
       0.561
Psed_4200
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: mil:ML5_4648 MmgE/PrpD family protein.
       0.561
Psed_4201
Allantoinase; KEGG: mil:ML5_4647 amidohydrolase; PFAM: Amidohydrolase 1.
       0.561
Psed_4202
HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; KEGG: mau:Micau_3753 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.561
Psed_4194
Peptidase dimerization domain protein; PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: mil:ML5_4655 peptidase M20.
       0.498
Psed_4195
PFAM: Alpha/beta hydrolase fold-1; KEGG: mau:Micau_3745 alpha/beta hydrolase fold protein.
       0.498
Psed_4196
KEGG: mil:ML5_4653 peroxiredoxin, ohr subfamily; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein.
       0.498
Psed_4197
KEGG: mil:ML5_4651 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal.
       0.498
Psed_4198
KEGG: mau:Micau_3749 formyl-CoA transferase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
       0.498
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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