STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4470Regulatory protein ArsR; KEGG: sro:Sros_7536 putative transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR. (110 aa)    
Predicted Functional Partners:
Psed_4471
PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: cwo:Cwoe_1479 activator of HSP90 ATPase 1 family protein.
    0.937
Psed_4947
Regulatory protein ArsR; KEGG: ccs:CCNA_01339 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.753
Psed_3239
Regulatory protein ArsR; KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.752
Psed_5956
Transcriptional regulator, ArsR family; KEGG: rer:RER_59200 nitrile hydratase regulator 2; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.736
Psed_3772
Regulatory protein ArsR; KEGG: rha:RHA1_ro05363 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR.
  
     0.719
Psed_5877
Regulatory protein ArsR; SMART: HTH transcriptional regulator, ArsR; KEGG: fal:FRAAL3030 ArsR family transcriptional regulator.
  
     0.670
Psed_6308
KEGG: hau:Haur_1072 activator of HSP90 ATPase 1 family protein; manually curated; PFAM: Activator of Hsp90 ATPase homologue 1-like.
 
    0.586
Psed_2043
PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: gob:Gobs_4877 activator of HSP90 ATPase 1 family protein.
 
    0.427
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.