STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4505Sulfite reductase (ferredoxin); KEGG: amd:AMED_6656 ferredoxin-nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (559 aa)    
Predicted Functional Partners:
Psed_4507
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
 0.999
Psed_4509
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.984
Psed_4508
TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: sen:SACE_1474 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase.
 
  
 0.981
Psed_2727
uroporphyrin-III C-methyltransferase; KEGG: nfa:nfa40770 putative uroporphyrinogen III methylase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; PFAM: Tetrapyrrole methylase.
 
  
 0.960
Psed_0939
PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: nml:Namu_4420 cystathionine gamma-synthase.
  
 0.950
Psed_4039
Cysteine synthase; KEGG: aau:AAur_pTC20181 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit.
  
 
 0.940
Psed_4506
KEGG: amd:AMED_6657 hypothetical protein.
  
  
 0.931
Psed_4513
KEGG: sen:SACE_1472 cobalamin (vitamin B12) biosynthesis CbiX protein; manually curated; PFAM: Cobalamin (vitamin B12) biosynthesis CbiX.
 
  
 0.926
Psed_0455
Thiosulfate sulfurtransferase; PFAM: Rhodanese-like; KEGG: ami:Amir_6828 rhodanese domain protein; SMART: Rhodanese-like.
 
  
 0.925
Psed_5264
Thiosulfate sulfurtransferase; PFAM: Rhodanese-like; KEGG: kra:Krad_3079 rhodanese domain protein; SMART: Rhodanese-like.
    
 0.916
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.