Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4516KEGG: ami:Amir_6222 hypothetical protein. (650 aa)    
Predicted Functional Partners:
Psed_4933
PFAM: Protein of unknown function DUF1684; KEGG: rop:ROP_19320 hypothetical protein.
 
     0.557
Psed_6105
KEGG: gbr:Gbro_0965 hypothetical protein.
  
     0.475
Psed_6409
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sro:Sros_4758 hypothetical protein.
   
    0.465
Psed_4517
KEGG: sma:SAV_6696 monooxygenase; PFAM: Luciferase-like, subgroup.
 
     0.462
Psed_2040
KEGG: gob:Gobs_3193 putative transmembrane anti-sigma factor.
  
     0.441
Psed_4403
KEGG: gbr:Gbro_2527 hypothetical protein.
 
     0.429
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.