STRINGSTRING
Psed_4567 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4567" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4567Hypothetical protein (294 aa)    
Predicted Functional Partners:
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate (255 aa)
   
        0.820
Psed_4566
2-oxoglutarate dehydrogenase E2 (614 aa)
   
        0.764
Psed_4565
Dihydrolipoamide dehydrogenase (464 aa)
   
        0.694
Psed_5936
Alkyl hydroperoxide reductase (222 aa)
   
        0.691
Psed_4703
Alkyl hydroperoxide reductase (154 aa)
   
        0.691
Psed_2143
Alkyl hydroperoxide reductase (152 aa)
   
        0.691
Psed_1524
Alkyl hydroperoxide reductase (155 aa)
   
        0.691
Psed_2723
Magnesium chelatase (755 aa)
 
        0.607
Psed_0614
Deoxyribodipyrimidine photo-lyase (462 aa)
 
   
  0.594
Psed_6422
Type 12 methyltransferase (228 aa)
   
          0.562
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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