STRINGSTRING
Psed_4697 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4697" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4697Hypothetical protein (241 aa)    
Predicted Functional Partners:
Psed_4699
Hypothetical protein (257 aa)
 
          0.936
Psed_4700
Cyclopropane-fatty-acyl-phospholipid synthase (418 aa)
 
          0.929
Psed_4698
Amine oxidase (429 aa)
 
          0.927
Psed_4702
Hypothetical protein (277 aa)
 
          0.819
Psed_4701
Cyclopropane-fatty-acyl-phospholipid synthase (458 aa)
 
          0.809
Psed_4665
Hypothetical protein (233 aa)
   
          0.622
Psed_5732
Transglycosylase-like domain-containing protein (233 aa)
   
          0.621
Psed_5736
Transglycosylase-like domain-containing protein (202 aa)
   
          0.609
Psed_0990
ABC transporter integral membrane protein (283 aa)
   
          0.607
Psed_5649
Major facilitator superfamily protein (662 aa)
   
          0.603
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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