Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4698PFAM: Amine oxidase; KEGG: sgr:SGR_5877 putative amine oxidoreductase. (429 aa)    
Predicted Functional Partners:
Psed_4700
KEGG: amd:AMED_2870 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase.
  
 0.996
Psed_4699
PFAM: Protein of unknown function DUF1365; KEGG: rer:RER_23220 hypothetical protein.
  
 0.988
Psed_4701
KEGG: amd:AMED_2950 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase.
  
 0.977
Psed_4702
PFAM: Protein of unknown function DUF1295; KEGG: cai:Caci_4267 protein of unknown function DUF1295.
     0.964
Psed_2919
PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase; KEGG: sen:SACE_1992 cyclopropane-fatty-acyl-phospholipid synthase; SMART: Polyketide synthase, methyltransferase domain.
  
 0.924
Psed_4697
KEGG: sen:SACE_6750 hypothetical protein.
 
     0.923
Psed_4696
KEGG: amd:AMED_6935 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase.
 
     0.552
Psed_0614
KEGG: rer:RER_45790 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
 
   
 0.495
Psed_4703
PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: tcu:Tcur_1893 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.486
Psed_5621
beta-Ig-H3/fasciclin; KEGG: amd:AMED_7496 fasciclin repeat-containing protein; PFAM: FAS1 domain; SMART: FAS1 domain.
 
   
 0.473
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.