STRINGSTRING
Psed_4772 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4772" - DAK2 domain fusion protein YloV in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4772DAK2 domain fusion protein YloV (552 aa)    
Predicted Functional Partners:
Psed_2008
degV family protein (307 aa)
        0.947
Psed_4771
ATP-dependent DNA helicase RecG (748 aa)
 
   
  0.848
rpmB
50S ribosomal protein L28 (63 aa)
         
  0.702
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1186 aa)
 
          0.578
Psed_0326
Cell envelope-related transcriptional attenuator (344 aa)
 
          0.516
Psed_2910
Hypothetical protein (171 aa)
 
     
  0.502
Psed_5884
Hypothetical protein (287 aa)
   
          0.470
Psed_6309
Hypothetical protein (303 aa)
   
          0.438
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (328 aa)
              0.412
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (226 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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