Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_4941Formyl-CoA transferase; KEGG: bbt:BBta_2631 putative formyl-coenzyme A transferase, putative L-carnitine dehydratase; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family. (407 aa)    
Predicted Functional Partners:
Psed_4942
PFAM: Crotonase, core; KEGG: bge:BC1002_4061 enoyl-CoA hydratase/isomerase.
  
 
 0.815
Psed_4940
Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: bbt:BBta_2632 putative fumarylacetoacetate (FAA) hydrolase.
  
    0.781
Psed_4943
Regulatory protein TetR; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: msm:MSMEG_3360 transcriptional regulator, putative.
  
    0.551
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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