STRINGSTRING
Psed_4971 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_4971" - Glyoxalase/bleomycin resistance protein/dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4971Glyoxalase/bleomycin resistance protein/dioxygenase (178 aa)    
Predicted Functional Partners:
Psed_4973
Pyruvate dehydrogenase (326 aa)
              0.863
Psed_4972
Biotin/lipoyl attachment domain-containing protein (79 aa)
              0.859
Psed_4974
Pyruvate dehydrogenase (337 aa)
              0.840
Psed_4970
Type 11 methyltransferase (277 aa)
              0.779
Psed_4040
Hypothetical protein (228 aa)
   
          0.649
Psed_3730
Carboxymuconolactone decarboxylase (186 aa)
 
          0.577
Psed_2581
Amidohydrolase (380 aa)
   
          0.555
Psed_3262
Hypothetical protein (238 aa)
   
          0.547
Psed_3703
Hydrolase or acyltransferase of alpha/beta superfamily (239 aa)
   
          0.540
Psed_4290
Alpha/beta hydrolase (234 aa)
 
          0.538
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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