Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Psed_4971PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nar:Saro_1865 hypothetical protein. (178 aa)    
Predicted Functional Partners:
Psed_4974
KEGG: rxy:Rxyl_3050 pyruvate dehydrogenase; PFAM: Dehydrogenase, E1 component.
 
  
 0.816
Psed_4972
PFAM: Biotin/lipoyl attachment; KEGG: sjp:SJA_C1-18650 putative acyltransferase.
  
 
 0.809
Psed_4973
Pyruvate dehydrogenase (acetyl-transferring); PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: sjp:SJA_C1-18660 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain.
     
 0.786
Psed_1573
SMART: Biotin carboxylase, C-terminal; manually curated; KEGG: gob:Gobs_2423 carbamoyl-phosphate synthase L chain ATP-binding protein; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase.
  
 
 0.764
Psed_6345
PFAM: Homogentisate 1,2-dioxygenase; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase.
  
 
 0.717
Psed_4970
PFAM: Methyltransferase type 11; KEGG: fal:FRAAL5015 putative methyltransferase.
     
 0.714
Psed_4005
KEGG: sen:SACE_3154 biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; Carboxyl transferase; SMART: Biotin carboxylase, C-terminal.
 
  
 0.615
Psed_4969
KEGG: amd:AMED_4854 catechol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal.
     
 0.516
Psed_0974
PFAM: Nitroreductase-like; KEGG: cti:RALTA_A1302 putative nitroreductase.
 
  
 0.497
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
     
 0.489
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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