STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_4973Pyruvate dehydrogenase (acetyl-transferring); PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; KEGG: sjp:SJA_C1-18660 pyruvate dehydrogenase E1 component beta subunit; SMART: Transketolase-like, pyrimidine-binding domain. (326 aa)    
Predicted Functional Partners:
Psed_5115
2-oxoglutarate dehydrogenase, E1 subunit; SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: ami:Amir_6253 alpha-ketoglutarate decarboxylase; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; 2-oxoacid dehydrogenase acyltransferase, catalytic domain.
  
 0.999
Psed_4974
KEGG: rxy:Rxyl_3050 pyruvate dehydrogenase; PFAM: Dehydrogenase, E1 component.
 0.997
Psed_3075
Pyruvate dehydrogenase (acetyl-transferring); KEGG: kfl:Kfla_6568 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); PFAM: Dehydrogenase, E1 component.
 0.995
Psed_2074
Pyruvate dehydrogenase (acetyl-transferring); KEGG: tro:trd_1493 TPP-dependent acetoin dehydrogenase alpha-subunit; PFAM: Dehydrogenase, E1 component.
 0.993
Psed_3708
KEGG: cwo:Cwoe_4083 pyruvate dehydrogenase (acetyl-transferring); PFAM: Dehydrogenase, E1 component.
 0.984
Psed_3728
Pyruvate dehydrogenase (acetyl-transferring); KEGG: rha:RHA1_ro08623 acetoin dehydrogenase alpha subunit; PFAM: Dehydrogenase, E1 component.
 0.982
Psed_3710
Pyruvate dehydrogenase (acetyl-transferring); KEGG: bha:BH0776 acetoin dehydrogenase (TPP-dependent) alpha chain; PFAM: Dehydrogenase, E1 component.
 0.979
Psed_6610
TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit subgroup x; KEGG: sen:SACE_7294 pyruvate dehydrogenase E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component.
 0.977
Psed_4972
PFAM: Biotin/lipoyl attachment; KEGG: sjp:SJA_C1-18650 putative acyltransferase.
 
 0.952
Psed_3712
Dihydrolipoyllysine-residue acetyltransferase; KEGG: cwo:Cwoe_0765 catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding.
 
 0.946
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.