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Psed_5000 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5000" - uracil-DNA glycosylase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5000uracil-DNA glycosylase (209 aa)    
Predicted Functional Partners:
Psed_4999
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (176 aa)
              0.823
Psed_4998
Hypothetical protein (147 aa)
              0.782
Psed_4997
Oxidoreductase FAD-binding domain-containing protein (240 aa)
              0.716
Psed_4996
Oxidoreductase molybdopterin binding protein (203 aa)
              0.707
Psed_5001
OsmC family protein (299 aa)
              0.677
Psed_5370
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (480 aa)
              0.563
Psed_2761
DNA polymerase III subunit epsilon (586 aa)
         
  0.514
Psed_3563
ATPase AAA (456 aa)
     
      0.489
Psed_5364
Ribosomal-protein-alanine acetyltransferase (157 aa)
 
          0.483
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (742 aa)
         
  0.419
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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