STRINGSTRING
Psed_5358 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_5358" - Transcription factor WhiB in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Psed_5358Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (104 aa)    
Predicted Functional Partners:
Psed_5204
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (111 aa)
   
     
  0.810
Psed_4736
Hypothetical protein (107 aa)
   
          0.769
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
   
     
  0.761
Psed_1121
Hypothetical protein (514 aa)
   
          0.746
Psed_3321
RecB family exonuclease (371 aa)
   
          0.742
Psed_3055
Hypothetical protein (100 aa)
   
          0.731
Psed_3275
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (113 aa)
   
          0.702
Psed_6587
Transglycosylase-like domain-containing protein (582 aa)
   
          0.687
Psed_3162
Regulatory protein MerR (207 aa)
   
          0.687
Psed_5732
Transglycosylase-like domain-containing protein (233 aa)
   
          0.680
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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