STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_5501PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_4573 short-chain dehydrogenase/reductase SDR. (263 aa)    
Predicted Functional Partners:
Psed_6331
Transcriptional regulator, LuxR family; PFAM: Short-chain dehydrogenase/reductase SDR; Transcription regulator LuxR, C-terminal; Tetratricopeptide TPR-4; KEGG: mes:Meso_2493 short-chain dehydrogenase/reductase SDR; SMART: Transcription regulator LuxR, C-terminal.
  
     0.769
Psed_2274
KEGG: ava:Ava_4328 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.766
Psed_2232
3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: fal:FRAAL2457 putative short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.763
Psed_2539
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_3937 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.
  
     0.763
Psed_3311
Short-chain dehydrogenase/reductase SDR; KEGG: mbt:JTY_1080 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.763
Psed_1361
KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.761
Psed_2253
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_0332 short-chain dehydrogenase/reductase SDR.
  
     0.759
Psed_3224
KEGG: mav:MAV_3101 oxidoreductase, short chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.759
Psed_1459
KEGG: sti:Sthe_2868 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.758
Psed_2586
KEGG: aac:Aaci_2398 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.758
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.