STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6155KEGG: sen:SACE_7037 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain. (382 aa)    
Predicted Functional Partners:
Psed_0649
3-hydroxybutyryl-CoA epimerase; KEGG: sma:SAV_1680 fatty acid oxidation complex alpha-subunit; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal.
  
 0.972
Psed_1344
PFAM: Crotonase, core; KEGG: pla:Plav_1028 enoyl-CoA hydratase/isomerase.
  
 0.945
Psed_3213
PFAM: Crotonase, core; KEGG: fal:FRAAL3799 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Psed_4414
3-hydroxyisobutyryl-CoA hydrolase; KEGG: fri:FraEuI1c_3494 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core.
  
 0.945
Psed_4539
PFAM: Crotonase, core; KEGG: amd:AMED_3863 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Psed_5548
PFAM: Crotonase, core; KEGG: ami:Amir_6663 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Psed_6217
KEGG: fre:Franean1_2500 enoyl-CoA hydratase; PFAM: Crotonase, core; Peptidase S49; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Psed_6333
PFAM: Crotonase, core; KEGG: cwo:Cwoe_2706 enoyl-CoA hydratase/isomerase.
  
 0.945
Psed_6462
PFAM: Crotonase, core; KEGG: pzu:PHZ_p0199 enoyl-CoA hydratase/isomerase family protein.
  
 0.943
Psed_1772
KEGG: sen:SACE_6196 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal.
 
 0.909
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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