STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_6464PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: dge:Dgeo_1081 6-phosphogluconate dehydrogenase, NAD-binding. (312 aa)    
Predicted Functional Partners:
Psed_3762
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ace:Acel_1799 methylmalonate-semialdehyde dehydrogenase (acylating); PFAM: Aldehyde dehydrogenase domain.
 
 
 0.926
Psed_1800
KEGG: sen:SACE_2895 betaine-aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.916
Psed_1899
PFAM: Aldehyde dehydrogenase domain; KEGG: sen:SACE_1341 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.916
Psed_2161
PFAM: Aldehyde dehydrogenase domain; KEGG: fri:FraEuI1c_2858 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.916
Psed_6460
PFAM: Carboxymuconolactone decarboxylase; KEGG: rec:RHECIAT_PC0000387 gamma-carboxymuconolactone decarboxylase protein.
  
  
 0.838
Psed_6176
KEGG: cai:Caci_3363 acyl-CoA oxidase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase, C-terminal.
  
 
 0.825
Psed_6461
KEGG: mrd:Mrad2831_3250 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding.
 
    
0.821
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.812
Psed_0562
Acetate--CoA ligase; KEGG: nml:Namu_2393 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
  
 
 0.812
Psed_2717
Butyrate--CoA ligase; KEGG: sen:SACE_3902 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
  
 
 0.812
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: P. dioxanivorans CB1190, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.