EEX38551.1 protein (Vibrio metschnikovii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EEX38551.1

L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1. (396 aa)

Predicted Functional Partners:

EEX38552.1

0.999

EEX38553.1

0.999

betI

0.813

betA

0.781

EEX38555.1

0.538

EEX37057.1

0.496

EEX38337.1

0.413

EEX37294.1

0.405

Your Current Organism:

Vibrio metschnikovii

NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEX37057.1	EEX37294.1	VIB_001168	VIB_001414	ABC transporter ATP-binding protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.512
EEX37057.1	EEX38337.1	VIB_001168	VIB_000282	ABC transporter ATP-binding protein.	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.401
EEX37057.1	EEX38551.1	VIB_001168	VIB_000015	ABC transporter ATP-binding protein.	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	0.496
EEX37294.1	EEX37057.1	VIB_001414	VIB_001168	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter ATP-binding protein.	0.512
EEX37294.1	EEX38337.1	VIB_001414	VIB_000282	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.644
EEX37294.1	EEX38551.1	VIB_001414	VIB_000015	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	0.405
EEX38337.1	EEX37057.1	VIB_000282	VIB_001168	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter ATP-binding protein.	0.401
EEX38337.1	EEX37294.1	VIB_000282	VIB_001414	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.644
EEX38337.1	EEX38551.1	VIB_000282	VIB_000015	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	0.413
EEX38337.1	EEX38552.1	VIB_000282	VIB_000016	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1.	0.430
EEX38337.1	EEX38553.1	VIB_000282	VIB_000017	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	L-proline glycine betaine binding ABC transporter protein proX; TC 3.A.1.12.1.	0.460
EEX38551.1	EEX37057.1	VIB_000015	VIB_001168	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	ABC transporter ATP-binding protein.	0.496
EEX38551.1	EEX37294.1	VIB_000015	VIB_001414	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.405
EEX38551.1	EEX38337.1	VIB_000015	VIB_000282	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.413
EEX38551.1	EEX38552.1	VIB_000015	VIB_000016	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1.	0.999
EEX38551.1	EEX38553.1	VIB_000015	VIB_000017	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	L-proline glycine betaine binding ABC transporter protein proX; TC 3.A.1.12.1.	0.999
EEX38551.1	EEX38555.1	VIB_000015	VIB_000019	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.538
EEX38551.1	betA	VIB_000015	VIB_000018	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.	0.781
EEX38551.1	betI	VIB_000015	VIB_000020	L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.	HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.	0.813
EEX38552.1	EEX38337.1	VIB_000016	VIB_000282	L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1.	iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.430

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About