STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38552.1L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1. (279 aa)    
Predicted Functional Partners:
EEX38551.1
L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.
 
 0.999
EEX38553.1
L-proline glycine betaine binding ABC transporter protein proX; TC 3.A.1.12.1.
 
 0.999
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
     0.781
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
  
 0.767
EEX38555.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   
 0.557
EEX36114.1
Maltose/maltodextrin ABC transporter permease protein MalF.
     
 0.550
EEX38251.1
Predicted permease.
     
  0.540
EEX38252.1
Putative membrane protein.
     
  0.540
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
     
  0.540
EEX36115.1
Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
     
  0.540
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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