Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX38553.1L-proline glycine betaine binding ABC transporter protein proX; TC 3.A.1.12.1. (225 aa)    
Predicted Functional Partners:
EEX38551.1
L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.
 
 0.999
EEX38552.1
L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1.
 
 0.999
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
     0.889
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.858
EEX38555.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.689
EEX37050.1
Chemotaxis protein CheV.
     
  0.606
EEX37474.1
Chemotaxis protein CheV.
     
  0.606
EEX36404.1
Chemotaxis protein CheV.
     
  0.606
EEX37017.1
Peptide transport periplasmic protein SapA; TC 3.A.1.5.5.
  
  
  0.516
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.514
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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