STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betACholine dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (579 aa)    
Predicted Functional Partners:
EEX38555.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.994
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
 
 0.976
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.874
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
     
  0.866
EEX38553.1
L-proline glycine betaine binding ABC transporter protein proX; TC 3.A.1.12.1.
 
   
 0.858
EEX36103.1
Flavodoxin reductases, family 1.
 
  
 0.811
EEX36824.1
NADH oxidoreductase Hcr.
 
  
 0.809
EEX38551.1
L-proline Glycine Betaine ABC transport ATP-binding protein proV; TC 3.A.1.12.1.
 
   
 0.781
EEX38552.1
L-proline Glycine Betaine ABC transport system permease protein proW; TC 3.A.1.12.1.
 
  
 0.767
kefB
Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.
    
 0.709
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.