STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
betACholine dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (579 aa)    
Predicted Functional Partners:
EEX38555.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.979
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
 
 0.935
EEX36822.1
Alcohol dehydrogenase; Most likely function alternative not yet resolved; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.877
EEX38485.1
Putative membrane protein.
    
 0.836
EEX36525.1
Hypothetical protein.
    
 0.836
EEX35593.1
Hypothetical protein.
    
 0.836
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
  0.807
EEX37139.1
tPR domain protein putative component of TonB system.
    
 0.797
EEX37992.1
MSHA biogenesis protein MshN.
    
 0.797
EEX36200.1
Hypothetical protein.
    
 0.797
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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