STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX38557.1Xaa-Pro aminopeptidase. (595 aa)    
Predicted Functional Partners:
EEX36547.1
Aminoacyl-histidine dipeptidase (Peptidase D).
 
 
 0.815
EEX36545.1
Predicted deacylase.
    
 0.793
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.766
EEX38558.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.702
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
 
   
 0.697
dadA
D-amino acid dehydrogenase small subunit; Oxidative deamination of D-amino acids.
  
 
 0.694
EEX36449.1
L-ectoine synthase.
  
 
 0.688
EEX36766.1
2,4-dienoyl-CoA reductase [NADPH].
    
 0.684
EEX38559.1
Putative multidrug resistance protein.
     
 0.677
EEX36023.1
Aminomethyltransferase (glycine cleavage system T protein).
 
 0.636
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.