Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEX37320.1 | EEX38036.1 | VIB_001440 | VIB_000405 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | Ribosome-associated heat shock protein; Implicated in the recycling of the LSU (S4 paralog). | 0.428 |
| EEX37320.1 | lolB | VIB_001440 | VIB_000735 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.532 |
| EEX37320.1 | rsmJ | VIB_001440 | VIB_000026 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.444 |
| EEX37494.1 | EEX38036.1 | VIB_001619 | VIB_000405 | Hypothetical protein. | Ribosome-associated heat shock protein; Implicated in the recycling of the LSU (S4 paralog). | 0.460 |
| EEX37494.1 | lolB | VIB_001619 | VIB_000735 | Hypothetical protein. | Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.483 |
| EEX37494.1 | rnpA | VIB_001619 | VIB_003024 | Hypothetical protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.478 |
| EEX37494.1 | rsmJ | VIB_001619 | VIB_000026 | Hypothetical protein. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.579 |
| EEX38036.1 | EEX37320.1 | VIB_000405 | VIB_001440 | Ribosome-associated heat shock protein; Implicated in the recycling of the LSU (S4 paralog). | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.428 |
| EEX38036.1 | EEX37494.1 | VIB_000405 | VIB_001619 | Ribosome-associated heat shock protein; Implicated in the recycling of the LSU (S4 paralog). | Hypothetical protein. | 0.460 |
| EEX38036.1 | rsmJ | VIB_000405 | VIB_000026 | Ribosome-associated heat shock protein; Implicated in the recycling of the LSU (S4 paralog). | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.543 |
| EEX38460.1 | rsmJ | VIB_000115 | VIB_000026 | Putative transposase. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.435 |
| EEX38561.1 | EEX38563.1 | VIB_000025 | VIB_000027 | Transcriptional regulator AsnC. | Hypothetical protein. | 0.403 |
| EEX38561.1 | rsmJ | VIB_000025 | VIB_000026 | Transcriptional regulator AsnC. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.500 |
| EEX38563.1 | EEX38561.1 | VIB_000027 | VIB_000025 | Hypothetical protein. | Transcriptional regulator AsnC. | 0.403 |
| EEX38563.1 | rsmJ | VIB_000027 | VIB_000026 | Hypothetical protein. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.593 |
| coaD | rsmJ | VIB_002942 | VIB_000026 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.693 |
| lolB | EEX37320.1 | VIB_000735 | VIB_001440 | Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. | 0.532 |
| lolB | EEX37494.1 | VIB_000735 | VIB_001619 | Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Hypothetical protein. | 0.483 |
| lolB | rsmJ | VIB_000735 | VIB_000026 | Outer membrane lipoprotein LolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.534 |
| rnpA | EEX37494.1 | VIB_003024 | VIB_001619 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein. | 0.478 |
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