STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38567.1NAD(FAD)-utilizing dehydrogenase. (395 aa)    
Predicted Functional Partners:
EEX36824.1
NADH oxidoreductase Hcr.
     
  0.617
EEX36103.1
Flavodoxin reductases, family 1.
     
  0.617
EEX38568.1
Tn7-like transposition protein A.
       0.524
EEX38570.1
Tn7-like transposition protein C.
       0.516
EEX38569.1
Tn7-like transposition protein B.
  
    0.495
EEX38564.1
Putative acetate efflux pump MadN.
  
    0.491
EEX38565.1
Universal stress protein A.
       0.486
EEX38566.1
Ferritin-like protein 2; Iron-storage protein.
       0.486
EEX38571.1
Transposition protein TnsD-related protein.
       0.437
EEX35847.1
Glyoxalase family protein.
  
    0.421
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.