STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38569.1Tn7-like transposition protein B. (715 aa)    
Predicted Functional Partners:
EEX38570.1
Tn7-like transposition protein C.
 
 
 0.985
EEX38568.1
Tn7-like transposition protein A.
 
  
 0.950
EEX37919.1
Tn7-like transposition protein C.
 
 
 0.938
EEX38571.1
Transposition protein TnsD-related protein.
 
     0.926
EEX37921.1
Tn7-like transposition protein A.
  
 0.794
EEX37918.1
Tn7-like transposition protein D.
 
   
 0.791
EEX38531.1
Transposase IS605 OrfB family.
    
   0.764
EEX37917.1
Hypothetical protein.
 
   
 0.692
EEX38572.1
Hypothetical protein.
       0.516
EEX38567.1
NAD(FAD)-utilizing dehydrogenase.
  
    0.499
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.