STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38628.1O-methyltransferase-related protein. (270 aa)    
Predicted Functional Partners:
EEX38629.1
DNA-damage-inducible protein F.
 
     0.753
lexA
SOS-response repressor and protease LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
       0.737
EEX36456.1
MoxR-like ATPase.
  
     0.676
EEX36232.1
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
  
     0.671
EEX36873.1
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.647
EEX37327.1
Hypothetical protein.
  
     0.643
EEX37506.1
Hypothetical protein.
  
     0.635
EEX37114.1
Hypothetical protein.
  
    0.620
EEX38033.1
Hypothetical protein.
  
     0.616
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
       0.611
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.