STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38446.1IS66 Orf2 family protein. (108 aa)    
Predicted Functional Partners:
EEX38455.1
iSPsy5 transposase.
 
     0.778
EEX38515.1
iSPsy5 transposase.
 
     0.778
EEX37441.1
Transposase IS66.
 
     0.778
EEX36509.1
Transposase IS66.
 
     0.778
EEX35813.1
Transposase IS66.
 
     0.778
EEX38636.1
Transposase IS66.
  
     0.774
EEX38510.1
iSPsy5 transposase.
 
     0.751
EEX38445.1
Hypothetical protein.
       0.518
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.