STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38456.1Sucrose operon repressor ScrR LacI family. (321 aa)    
Predicted Functional Partners:
EEX37817.1
Glutamate synthase [NADPH] large chain.
    
 
 0.885
EEX38458.1
PTS system maltose and glucose-specific IIBC component.
 
  
 0.790
EEX35980.1
Galactose operon repressor; GalR-LacI family of transcriptional regulators.
  
     0.756
EEX35981.1
Galactose operon repressor; GalR-LacI family of transcriptional regulators.
  
     0.754
EEX38457.1
Alpha-glucosidase.
 
 
  0.738
EEX35966.1
Fructose repressor FruR LacI family.
  
     0.729
EEX37624.1
Phosphotransferase system trehalose-specific IIBC component.
 
  
 0.675
EEX37397.1
Phosphotransferase system sucrose-specific IIBC component.
 
  
 0.621
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
   0.595
EEX38459.1
Exodeoxyribonuclease III.
 
     0.593
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.