STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38468.1Hypothetical protein. (102 aa)    
Predicted Functional Partners:
EEX38466.1
ABC transporter permease protein.
 
     0.877
EEX38464.1
Transcriptional regulator TetR family.
 
     0.876
EEX38465.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.864
EEX38467.1
ABC transporter ATP-binding protein.
 
     0.856
EEX38469.1
Hypothetical protein; Predicted metal-dependent hydrolase.
       0.689
EEX38470.1
Hypothetical protein.
       0.675
EEX38483.1
Transposase.
  
     0.596
EEX38496.1
Transposase.
  
     0.581
EEX38482.1
Putative transposase subunit.
  
     0.513
EEX38301.1
Putative protease.
  
     0.445
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.