Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX38469.1Hypothetical protein; Predicted metal-dependent hydrolase. (46 aa)    
Predicted Functional Partners:
EEX38470.1
Hypothetical protein.
       0.761
EEX38468.1
Hypothetical protein.
       0.689
EEX38523.1
Type I site-specific deoxyribonuclease HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.479
EEX38467.1
ABC transporter ATP-binding protein.
   
   0.448
EEX38464.1
Transcriptional regulator TetR family.
       0.409
EEX38465.1
Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.409
EEX38466.1
ABC transporter permease protein.
       0.409
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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