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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX38486.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
EEX38485.1
Putative membrane protein.
 
 
   0.972
EEX38487.1
Hypothetical protein.
 
     0.942
EEX37086.1
Hypothetical protein.
 
 0.715
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
  
   0.687
EEX36616.1
Flagellar hook protein FlgE.
   
 0.676
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
  0.648
EEX36614.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.612
EEX37750.1
Phosphate transport system permease protein PstA; TC 3.A.1.7.1.
     
  0.607
EEX35732.1
Conserved hypothetical protein.
  
     0.596
EEX36618.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.583
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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