STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38491.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
EEX38523.1
Type I site-specific deoxyribonuclease HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.951
EEX37914.1
hsdS type I site-specific deoxyribonuclease.
 
 
 0.937
EEX38524.1
Type I restriction-modification system specificity subunit S.
 
 
 0.935
EEX36878.1
Type I restriction enzyme specificity protein.
  
 
 0.926
EEX38490.1
Hypothetical protein.
  
    0.582
EEX37554.1
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
 
 0.569
EEX36658.1
Flagellin protein FlaG.
    
   0.541
EEX38494.1
Hypothetical protein.
       0.470
EEX38492.1
Hypothetical protein.
       0.440
EEX38493.1
Hypothetical protein.
       0.440
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.