STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38524.1Type I restriction-modification system specificity subunit S. (405 aa)    
Predicted Functional Partners:
EEX37915.1
Type I restriction-modification system DNA-methyltransferase subunit M.
 
 
 0.995
EEX38525.1
Type I restriction-modification system M subunit.
 
 
 0.994
EEX38523.1
Type I site-specific deoxyribonuclease HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.990
EEX38491.1
Hypothetical protein.
 
 
 0.894
EEX37694.1
Helicase-related protein.
 
 
 0.868
EEX38526.1
Hypothetical protein; COG2378.
       0.781
EEX37914.1
hsdS type I site-specific deoxyribonuclease.
  
   
 0.547
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.515
atpF
ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
   
 
 0.502
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.