Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEX38272.1Carbon starvation protein A. (495 aa)    
Predicted Functional Partners:
EEX38271.1
Hypothetical protein.
       0.698
EEX36151.1
Transcriptional activator of acetoin/glycerol metabolism; COG3284.
  
    0.408
secA
Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
    
   0.406
EEX35909.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 1.
   
    0.406
EEX35910.1
Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component 2.
   
    0.406
EEX36276.1
Ribose ABC transport system permease protein RbsC; TC 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
   
    0.406
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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