Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX38288.1Transcriptional regulator VpsR. (442 aa)    
Predicted Functional Partners:
EEX37815.1
Aerobic respiration control sensor protein ArcB.
  
 0.882
EEX36753.1
Pyruvate-flavodoxin oxidoreductase.
    
 0.866
EEX38226.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.859
EEX36172.1
Hybrid sensory histidine kinase in two-component regulatory system with EvgA.
  
 0.855
EEX35659.1
Signal transduction histidine kinase.
   
 0.828
EEX38325.1
Chitin catabolic cascade sensor histidine kinase ChiS.
  
 0.822
EEX38405.1
BarA sensory histidine kinase.
  
 0.806
EEX38024.1
Nitrogen regulation protein NR(II).
 
 0.796
EEX35658.1
Multi-sensor hybrid histidine kinase.
   
 0.768
EEX36720.1
Flagellar synthesis regulator FleN.
  
 
 0.761
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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