STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38333.1Chitobiose phosphorylase. (801 aa)    
Predicted Functional Partners:
EEX38334.1
GlcNAc phosphomutase.
 
  
 0.924
EEX37069.1
Beta-glucosidase-related glycosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.850
EEX38332.1
Beta-hexosaminidase.
 
  
  0.846
EEX36215.1
Chitinase.
  
 
 0.843
EEX36059.1
Chitodextrinase precursor.
  
 
 0.834
nagK
ROK family protein; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.
     
 0.785
EEX37399.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.683
EEX36297.1
Glycosyl hydrolase family 31/fibronectin type III domain protein.
  
  
 0.661
nagZ
Beta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
    
 0.647
EEX36602.1
Beta-hexosaminidase.
 
  
  0.637
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.