STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX38340.1Hypothetical protein; Belongs to the UPF0231 family. (109 aa)    
Predicted Functional Partners:
EEX36351.1
Predicted N-ribosylNicotinamide CRP-like regulator.
  
 
   0.873
EEX38150.1
Cyclic AMP receptor protein.
    
   0.773
EEX36682.1
Hypothetical protein.
  
     0.675
EEX36216.1
Putative secreted protein; Belongs to the UPF0319 family.
  
     0.633
trpR
Trp operon repressor-like protein; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription.
  
     0.607
EEX35997.1
Hypothetical protein.
  
     0.559
EEX38341.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.554
EEX36715.1
Hypothetical protein.
  
     0.541
EEX38565.1
Universal stress protein A.
  
    0.540
EEX36946.1
Sensor histidine kinase.
   
   0.536
Your Current Organism:
Vibrio metschnikovii
NCBI taxonomy Id: 675813
Other names: V. metschnikovii CIP 69.14, Vibrio metschnikovii CIP 69.14, Vibrio metschnikovii str. CIP 69.14, Vibrio metschnikovii strain CIP 69.14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.